Players can activate Kakashi's Sharingan in “Naruto Shippuden: Clash of Ninja Revolution 3” by pressing back on the analog stick and pressing the special button. To use the attack after activating it, players need to hold the special button. The special attack, called jutsu, varies depending on the controller setup that the player is using.

“Naruto Shippuden: Clash of Ninja Revolution 3” on the Wii offers players four different controller options. This includes the Wii Remote, Wii Remote and Nunchuk, Classic Controller and GameCube controller. To pull off a jutsu using the Wii Remote and Nunchuk, players need to press down on the control pad. When using just the Wii Remote, the jutsu is pulled off by pressing both the 1 and 2 buttons on the controller. On both the GameCube controller and the Classic Controller, the jutsu is done by pressing the X button.

A special jutsu should not be confused with a substitution jutsu, which allows players to escape attacks. When using a substitution jutsu, players use 75 percent of their chakra and are teleported to the other side of their opponents, effectively evading their attacks. There are two different types of substitution jutsu moves to use in the game. The first is an offensive substitution jutsu teleport, which follows up the teleport with an attack. The other is a neutral substitution jutsu, which simply performs the teleport without attacking.